Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible mutagenesis protein | DIC56_00070 | Not Available | Negative | 16098 - 16853 | 26605.9 |
| hypothetical protein | DIC56_00075 | Not Available | Positive | 17060 - 17320 | 9501.82 |
| duf159 family protein | DIC56_00080 | Not Available | Positive | 17403 - 18080 | 25433.2 |
| dna polymerase iv | DIC56_00085 | Not Available | Positive | 18158 - 19240 | 39487.6 |
| duf1127 domain-containing protein | DIC56_00090 | Not Available | Negative | 19603 - 19749 | 5619.68 |
| hypothetical protein | DIC56_00100 | Not Available | Positive | 20260 - 20451 | 7191.44 |
| transcriptional regulator | DIC56_00105 | Not Available | Positive | 20459 - 20797 | 12702.2 |
| polyketide cyclase | DIC56_00110 | Not Available | Positive | 20794 - 21258 | 17558.5 |
| glutathione s-transferase | DIC56_00115 | Not Available | Positive | 21255 - 21839 | 21643.9 |
| hypothetical protein | DIC56_00120 | Not Available | Negative | 22011 - 22400 | 13932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
