Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase regulatory protein | DIC56_02850 | Not Available | Positive | 587567 - 588263 | 25461.7 |
| maf-like protein | DIC56_02855 | Not Available | Positive | 588306 - 588905 | 21683.2 |
| shikimate dehydrogenase | DIC56_02860 | Not Available | Positive | 588898 - 589758 | 30868.9 |
| dephospho-coa kinase | DIC56_02865 | Not Available | Positive | 589755 - 590360 | 21902.5 |
| dna polymerase iii subunit epsilon | DIC56_02870 | Not Available | Positive | 590353 - 590521 | 6408.64 |
| radical sam protein | DIC56_02875 | Not Available | Negative | 590522 - 590907 | 14224.6 |
| glycosyl transferase | DIC56_02880 | Not Available | Positive | 591038 - 591559 | 18935.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DIC56_02885 | Not Available | Negative | 591628 - 592518 | 31312.5 |
| hypothetical protein | DIC56_02890 | Not Available | Negative | 592614 - 594364 | 63937.8 |
| hypothetical protein | DIC56_02900 | Not Available | Positive | 595504 - 595734 | 8389.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
