Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde-activating protein | DIC56_02650 | Not Available | Positive | 546616 - 546972 | 12743.0 |
| urease-associated protein | DIC56_02655 | Not Available | Positive | 546926 - 547450 | 18936.6 |
| urease-associated protein | DIC56_02660 | Not Available | Positive | 547474 - 547920 | 16730.6 |
| urease operon accessory protein | DIC56_02665 | Not Available | Positive | 547939 - 548583 | 23143.1 |
| urease subunit alpha | DIC56_02670 | Not Available | Positive | 548589 - 550301 | 60746.9 |
| peroxiredoxin | DIC56_02675 | Not Available | Positive | 550473 - 551009 | 19998.6 |
| ggdef domain-containing protein | DIC56_02680 | Not Available | Positive | 551479 - 552324 | 30686.0 |
| urease accessory protein uree | DIC56_02685 | Not Available | Positive | 552421 - 552915 | 18462.9 |
| urease accessory protein uref | DIC56_02690 | Not Available | Positive | 552921 - 553592 | 23524.3 |
| duf3995 domain-containing protein | DIC56_02695 | Not Available | Positive | 553589 - 554026 | 15097.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
