Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_02600 | Not Available | Positive | 536688 - 537497 | 29589.6 |
| urea abc transporter substrate-binding protein | DIC56_02605 | Not Available | Positive | 537816 - 539108 | 46861.7 |
| urea abc transporter permease subunit urtb | DIC56_02610 | Not Available | Positive | 539273 - 540889 | 57277.6 |
| urea abc transporter permease subunit urtc | DIC56_02615 | Not Available | Positive | 540886 - 542049 | 41829.0 |
| urea abc transporter atp-binding protein urtd | DIC56_02620 | Not Available | Positive | 542055 - 542807 | 27493.2 |
| urea abc transporter atp-binding subunit urte | DIC56_02625 | Not Available | Positive | 542982 - 543677 | 25221.7 |
| polyhydroxybutyrate depolymerase | DIC56_02630 | Not Available | Positive | 543773 - 544903 | 39604.2 |
| urease accessory protein | DIC56_02635 | Not Available | Positive | 545139 - 545963 | 29236.3 |
| urease subunit gamma | DIC56_02640 | Not Available | Positive | 545989 - 546291 | 11110.6 |
| urease subunit beta | DIC56_02645 | Not Available | Positive | 546311 - 546616 | 11041.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
