Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | DIC56_02300 | Not Available | Positive | 477406 - 478035 | 22203.9 |
| cell division protein zapa | DIC56_02310 | Not Available | Negative | 478278 - 478664 | 13934.8 |
| hypothetical protein | DIC56_02315 | Not Available | Negative | 478711 - 478983 | 10307.2 |
| transketolase | DIC56_02320 | Not Available | Positive | 479319 - 481301 | 70678.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DIC56_02325 | Not Available | Positive | 481383 - 482393 | 35952.4 |
| potassium/proton antiporter | DIC56_02330 | Not Available | Positive | 482678 - 484438 | 62935.8 |
| phosphoglycerate kinase | DIC56_02335 | Not Available | Positive | 484527 - 484887 | 12766.5 |
| argp/lysg family dna-binding transcriptional regulator | DIC56_02340 | Not Available | Negative | 485103 - 486008 | 33273.8 |
| amino acid transporter | DIC56_02345 | Not Available | Positive | 486103 - 486714 | 22051.4 |
| amino acid transporter | DIC56_02350 | Not Available | Positive | 486726 - 487361 | 22162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
