Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DIC56_24090 | Not Available | Positive | 4795333 - 4796097 | 28345.7 |
| galactonate dehydratase | DIC56_24095 | Not Available | Positive | 4796137 - 4797285 | 42441.9 |
| hypothetical protein | DIC56_24100 | Not Available | Negative | 4797478 - 4797888 | 14973.7 |
| sugar abc transporter atp-binding protein | DIC56_24105 | Not Available | Negative | 4797900 - 4798988 | 39327.7 |
| abc transporter substrate-binding protein | DIC56_24110 | Not Available | Negative | 4799086 - 4800528 | 52172.0 |
| abc transporter permease | DIC56_24115 | Not Available | Negative | 4800596 - 4801624 | 37928.2 |
| abc transporter permease | DIC56_24120 | Not Available | Negative | 4801621 - 4802496 | 32521.5 |
| ribokinase | DIC56_24125 | Not Available | Negative | 4802493 - 4803440 | 32279.4 |
| aldehyde dehydrogenase | DIC56_24130 | Not Available | Negative | 4803487 - 4805859 | 84604.0 |
| deoxyribose-phosphate aldolase | DIC56_24135 | Not Available | Negative | 4805863 - 4806861 | 35568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
