Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphogluconate aldolase | DIC56_24040 | Not Available | Positive | 4785339 - 4785992 | 22258.0 |
| shikimate dehydrogenase | DIC56_24045 | Not Available | Positive | 4785989 - 4786942 | 34976.6 |
| oxidoreductase | DIC56_24050 | Not Available | Positive | 4786949 - 4787881 | 33345.6 |
| mbl fold metallo-hydrolase | DIC56_24055 | Not Available | Positive | 4787878 - 4788744 | 30508.3 |
| murr/rpir family transcriptional regulator | DIC56_24060 | Not Available | Positive | 4788826 - 4789704 | 32003.9 |
| short-chain dehydrogenase | DIC56_24065 | Not Available | Negative | 4789968 - 4790747 | 27393.0 |
| aldose 1-epimerase | DIC56_24070 | Not Available | Negative | 4790750 - 4791613 | 31949.7 |
| l-arabinose abc transporter permease arah | DIC56_24075 | Not Available | Negative | 4791610 - 4792560 | 33012.7 |
| l-arabinose abc transporter atp-binding protein arag | DIC56_24080 | Not Available | Negative | 4792578 - 4794083 | 54159.4 |
| sugar abc transporter substrate-binding protein | DIC56_24085 | Not Available | Negative | 4794148 - 4795131 | 34526.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
