Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_23715 | Not Available | Positive | 4727766 - 4728758 | 36305.1 |
| hypothetical protein | DIC56_23720 | Not Available | Positive | 4728873 - 4729478 | 23230.8 |
| hypothetical protein | DIC56_23725 | Not Available | Positive | 4729478 - 4729879 | 14600.5 |
| lactate dehydrogenase | DIC56_23730 | Not Available | Positive | 4730059 - 4735170 | 188741.0 |
| xre family transcriptional regulator | DIC56_23735 | Not Available | Negative | 4735399 - 4735827 | 15683.8 |
| type ii toxin-antitoxin system mqsr family toxin | DIC56_23740 | Not Available | Negative | 4735817 - 4736140 | 12015.4 |
| plasmid partitioning protein | DIC56_23745 | Not Available | Positive | 4736513 - 4738276 | 63596.0 |
| hypothetical protein | DIC56_23750 | Not Available | Positive | 4738584 - 4738868 | 10785.1 |
| hypothetical protein | DIC56_23755 | Not Available | Positive | 4739431 - 4740015 | 20754.3 |
| vapc toxin family pin domain ribonuclease | DIC56_23760 | Not Available | Negative | 4740053 - 4740526 | 17551.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
