Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine transaminase | DIC56_02145 | Not Available | Negative | 441738 - 442916 | 42339.0 |
| porin family protein | DIC56_02150 | Not Available | Negative | 443125 - 443943 | 28043.5 |
| cell envelope biogenesis protein ompa | DIC56_02155 | Not Available | Negative | 444123 - 444890 | 27659.5 |
| methyl-accepting chemotaxis protein | DIC56_02160 | Not Available | Negative | 445137 - 447461 | 82287.0 |
| alkane 1-monooxygenase | DIC56_02165 | Not Available | Negative | 447706 - 448707 | 35960.2 |
| crossover junction endodeoxyribonuclease ruvc | DIC56_02170 | Not Available | Positive | 448879 - 449391 | 18127.1 |
| holliday junction branch migration protein ruva | DIC56_02175 | Not Available | Positive | 449443 - 450060 | 21392.9 |
| holliday junction branch migration dna helicase ruvb | DIC56_02180 | Not Available | Positive | 450164 - 451204 | 38230.3 |
| damage-inducible protein dinb | DIC56_02185 | Not Available | Positive | 451209 - 451775 | 21151.2 |
| udp-glucose 4-epimerase | DIC56_02190 | Not Available | Negative | 451798 - 452679 | 31488.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
