Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | DIC56_22785 | Not Available | Positive | 4547108 - 4550284 | 118352.0 |
| hypothetical protein | DIC56_22790 | Not Available | Negative | 4550449 - 4550691 | 9156.64 |
| plasmid partitioning protein | DIC56_22795 | Not Available | Positive | 4551226 - 4552983 | 63554.1 |
| hypothetical protein | DIC56_22805 | Not Available | Positive | 4553870 - 4554181 | 12100.8 |
| hypothetical protein | DIC56_22810 | Not Available | Positive | 4554566 - 4555153 | 20792.3 |
| antirestriction protein ardc | DIC56_22815 | Not Available | Positive | 4555431 - 4556097 | 25013.6 |
| cold-shock protein | DIC56_22820 | Not Available | Positive | 4556743 - 4556946 | 7181.46 |
| hypothetical protein | DIC56_22825 | Not Available | Negative | 4557382 - 4557612 | 8416.81 |
| replication initiation protein repc | DIC56_22830 | Not Available | Negative | 4558395 - 4559639 | 46216.5 |
| plasmid partitioning protein repb | DIC56_22835 | Not Available | Negative | 4559796 - 4560791 | 36589.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
