Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | DIC56_22485 | Not Available | Positive | 4481769 - 4482059 | 10593.8 |
| hypothetical protein | DIC56_22490 | Not Available | Positive | 4482169 - 4482804 | 22818.4 |
| hypothetical protein | DIC56_22495 | Not Available | Negative | 4482858 - 4483856 | 36015.1 |
| cobaltochelatase subunit cobt | DIC56_22500 | Not Available | Negative | 4483866 - 4485755 | 69622.1 |
| cobaltochelatase subunit cobs | DIC56_22505 | Not Available | Negative | 4485771 - 4486763 | 36796.8 |
| molecular chaperone dnaj | DIC56_22510 | Not Available | Negative | 4486829 - 4487455 | 23275.5 |
| hypothetical protein | DIC56_22515 | Not Available | Positive | 4487565 - 4487846 | 10233.3 |
| hypothetical protein | DIC56_22520 | Not Available | Negative | 4487852 - 4489159 | 47575.8 |
| 3-dehydroquinate synthase | DIC56_22525 | Not Available | Negative | 4489156 - 4490283 | 40322.2 |
| shikimate kinase | DIC56_22530 | Not Available | Negative | 4490280 - 4490870 | 21881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
