Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DIC56_22280 | Not Available | Negative | 4447172 - 4447324 | 5621.87 |
| cytochrome-c oxidase, cbb3-type subunit ii | DIC56_22285 | Not Available | Negative | 4447336 - 4448067 | 27221.4 |
| cytochrome-c oxidase, cbb3-type subunit i | DIC56_22290 | Not Available | Negative | 4448082 - 4448684 | 22282.4 |
| cytochrome b | DIC56_22295 | Not Available | Positive | 4448910 - 4449491 | 21702.1 |
| disulfide bond formation protein b | DIC56_22300 | Not Available | Positive | 4449505 - 4450014 | 17278.6 |
| hnh endonuclease | DIC56_22305 | Not Available | Negative | 4450021 - 4450578 | 21207.2 |
| dna-3-methyladenine glycosidase | DIC56_22310 | Not Available | Negative | 4450654 - 4451322 | 23722.8 |
| trna glutamyl-q(34) synthetase gluqrs | DIC56_22315 | Not Available | Positive | 4451389 - 4452273 | 32280.4 |
| hypothetical protein | DIC56_22320 | Not Available | Negative | 4452238 - 4453140 | 32640.4 |
| short-chain dehydrogenase | DIC56_22325 | Not Available | Positive | 4453224 - 4454057 | 30673.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
