Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DIC56_22230 | Not Available | Negative | 4435253 - 4436194 | 34604.2 |
| sugar abc transporter permease | DIC56_22235 | Not Available | Negative | 4436187 - 4437089 | 33612.8 |
| abc transporter substrate-binding protein | DIC56_22240 | Not Available | Negative | 4437229 - 4438464 | 43304.2 |
| laci family transcriptional regulator | DIC56_22245 | Not Available | Positive | 4438913 - 4439956 | 37750.4 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DIC56_22250 | Not Available | Negative | 4439980 - 4441407 | 50546.3 |
| cbb3-type cytochrome oxidase assembly protein ccos | DIC56_22255 | Not Available | Negative | 4441512 - 4441667 | 5733.85 |
| cadmium-translocating p-type atpase | DIC56_22260 | Not Available | Negative | 4441664 - 4443970 | 81293.9 |
| cation transporter | DIC56_22265 | Not Available | Negative | 4443967 - 4444464 | 17863.7 |
| cytochrome c oxidase accessory protein ccog | DIC56_22270 | Not Available | Negative | 4444461 - 4446047 | 59451.0 |
| cytochrome-c oxidase, cbb3-type subunit iii | DIC56_22275 | Not Available | Negative | 4446305 - 4447168 | 30987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
