Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1345 domain-containing protein | DIC56_22180 | Not Available | Positive | 4424077 - 4424742 | 23678.1 |
| s-formylglutathione hydrolase | DIC56_22185 | Not Available | Positive | 4424767 - 4425600 | 31417.5 |
| hypothetical protein | DIC56_22190 | Not Available | Positive | 4425716 - 4426048 | 12321.0 |
| hypothetical protein | DIC56_22195 | Not Available | Positive | 4426203 - 4426577 | 13402.8 |
| glycoside hydrolase 43 family protein | DIC56_22200 | Not Available | Negative | 4426600 - 4428234 | 61238.0 |
| l-glyceraldehyde 3-phosphate reductase | DIC56_22205 | Not Available | Negative | 4428382 - 4429434 | 38860.2 |
| oxidoreductase | DIC56_22210 | Not Available | Negative | 4429504 - 4430637 | 40725.9 |
| xylose isomerase | DIC56_22215 | Not Available | Negative | 4430664 - 4431425 | 28135.9 |
| beta-mannosidase | DIC56_22220 | Not Available | Negative | 4431500 - 4433962 | 91331.5 |
| abc transporter atp-binding protein | DIC56_22225 | Not Available | Negative | 4434110 - 4435246 | 41424.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
