Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef-domain containing protein | DIC56_22070 | Not Available | Positive | 4400047 - 4402008 | 69782.6 |
| hypothetical protein | DIC56_22080 | Not Available | Negative | 4406168 - 4407520 | 50809.4 |
| hypothetical protein | DIC56_22085 | Not Available | Positive | 4407954 - 4408199 | 8504.14 |
| molecular chaperone dnaj | DIC56_22090 | Not Available | Negative | 4408205 - 4408873 | 24598.3 |
| hypothetical protein | DIC56_22095 | Not Available | Positive | 4409884 - 4410294 | 15638.9 |
| cold-shock protein | DIC56_22100 | Not Available | Positive | 4410582 - 4410794 | 7510.86 |
| trna dihydrouridine(20/20a) synthase dusa | DIC56_22105 | Not Available | Negative | 4410892 - 4411899 | 36432.8 |
| duf1489 domain-containing protein | DIC56_22110 | Not Available | Negative | 4411961 - 4412398 | 15852.2 |
| l-serine ammonia-lyase | DIC56_22115 | Not Available | Negative | 4412459 - 4413859 | 49401.0 |
| duf599 domain-containing protein | DIC56_22120 | Not Available | Positive | 4414440 - 4415132 | 25996.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
