Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ti-type conjugative transfer relaxase traa | DIC56_01915 | Not Available | Negative | 399414 - 404033 | 170572.0 |
| pilus assembly protein | DIC56_01920 | Not Available | Positive | 404256 - 404543 | 10270.1 |
| conjugal transfer protein trad | DIC56_01925 | Not Available | Positive | 404533 - 404766 | 8135.72 |
| ti-type conjugative transfer system protein trag | DIC56_01930 | Not Available | Positive | 404763 - 406682 | 70882.1 |
| hypothetical protein | DIC56_01935 | Not Available | Negative | 406809 - 407003 | 7227.89 |
| hypothetical protein | DIC56_01940 | Not Available | Negative | 407422 - 407649 | 8234.48 |
| wgr domain-containing protein | DIC56_01945 | Not Available | Positive | 407648 - 407935 | 10838.0 |
| duf736 domain-containing protein | DIC56_01950 | Not Available | Negative | 408522 - 408845 | 11542.8 |
| pin domain nuclease | DIC56_01960 | Not Available | Negative | 409460 - 409858 | 14684.7 |
| antitoxin of toxin-antitoxin stability system | DIC56_01965 | Not Available | Negative | 409855 - 410121 | 9669.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
