Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | DIC56_21545 | Not Available | Negative | 4304635 - 4306446 | 66644.5 |
| ribonuclease p protein component | DIC56_21550 | Not Available | Negative | 4306446 - 4306835 | 14734.9 |
| 50s ribosomal protein l34 | DIC56_21555 | Not Available | Negative | 4306868 - 4307002 | 5189.62 |
| chemotaxis protein | DIC56_21560 | Not Available | Positive | 4307446 - 4309509 | 73142.7 |
| histidine kinase | DIC56_21565 | Not Available | Positive | 4309743 - 4311227 | 53687.4 |
| Trna-arg | Not Available | Not Available | Positive | 4311363 - 4311439 | Not Available |
| hypothetical protein | DIC56_21575 | Not Available | Negative | 4311552 - 4312784 | 45599.3 |
| propionyl-coa--succinate coa transferase | DIC56_21580 | Not Available | Positive | 4313233 - 4314726 | 54248.6 |
| transcriptional regulator | DIC56_21585 | Not Available | Negative | 4314733 - 4315035 | 11283.6 |
| thiol reductase thioredoxin | DIC56_21590 | Not Available | Positive | 4315128 - 4315574 | 16026.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
