Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | DIC56_21445 | Not Available | Positive | 4288246 - 4288761 | 19162.3 |
| methionyl-trna formyltransferase | DIC56_21450 | Not Available | Positive | 4288833 - 4289768 | 33047.0 |
| trna pseudouridine(38-40) synthase trua | DIC56_21455 | Not Available | Positive | 4289768 - 4290523 | 27917.1 |
| arsenate reductase (glutaredoxin) | DIC56_21460 | Not Available | Positive | 4290635 - 4291042 | 15022.3 |
| arsenical resistance protein arsh | DIC56_21465 | Not Available | Positive | 4291047 - 4291784 | 28283.8 |
| hypothetical protein | DIC56_21470 | Not Available | Negative | 4291818 - 4292414 | 22077.0 |
| succinyl-diaminopimelate desuccinylase | DIC56_21475 | Not Available | Negative | 4292401 - 4293594 | 42922.1 |
| duf805 domain-containing protein | DIC56_21480 | Not Available | Negative | 4293702 - 4294088 | 14606.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DIC56_21485 | Not Available | Negative | 4294092 - 4294949 | 30216.1 |
| lysine decarboxylase | DIC56_21490 | Not Available | Positive | 4295104 - 4295964 | 32028.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
