Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | DIC56_21245 | Not Available | Positive | 4247495 - 4248127 | 22921.9 |
| pts iia-like nitrogen-regulatory protein ptsn | DIC56_21250 | Not Available | Negative | 4248179 - 4248643 | 16594.1 |
| ribosome-associated translation inhibitor raia | DIC56_21255 | Not Available | Negative | 4248713 - 4249297 | 21479.3 |
| rna polymerase sigma-54 factor | DIC56_21260 | Not Available | Negative | 4249533 - 4251104 | 57450.9 |
| lps export abc transporter atp-binding protein | DIC56_21265 | Not Available | Negative | 4251258 - 4252070 | 29827.2 |
| hypothetical protein | DIC56_21270 | Not Available | Negative | 4252087 - 4252644 | 20038.8 |
| lps export abc transporter periplasmic protein lptc | DIC56_21275 | Not Available | Negative | 4252659 - 4253324 | 23614.6 |
| integration host factor subunit beta | DIC56_21280 | Not Available | Positive | 4253657 - 4253959 | 11250.3 |
| duf1049 domain-containing protein | DIC56_21285 | Not Available | Positive | 4254096 - 4254440 | 12650.8 |
| sam-dependent methyltransferase | DIC56_21290 | Not Available | Positive | 4254549 - 4255679 | 41697.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
