Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_01865 | Not Available | Negative | 390081 - 390380 | 10690.9 |
| yafy family transcriptional regulator | DIC56_01870 | Not Available | Positive | 390466 - 391149 | 25469.7 |
| rna helicase | DIC56_01875 | Not Available | Positive | 391440 - 392843 | 50175.7 |
| eama family transporter | DIC56_01880 | Not Available | Negative | 392911 - 393795 | 31394.6 |
| hypothetical protein | DIC56_01885 | Not Available | Positive | 394211 - 394473 | 10146.1 |
| luxr family transcriptional regulator | DIC56_01890 | Not Available | Positive | 394759 - 395508 | 28256.6 |
| n-acyl-l-homoserine lactone (ahl) synthase | DIC56_01895 | Not Available | Positive | 395575 - 396240 | 25464.6 |
| duf2218 domain-containing protein | DIC56_01900 | Not Available | Positive | 396261 - 396605 | 12449.7 |
| zeta toxin | DIC56_01905 | Not Available | Negative | 396644 - 399115 | 91201.3 |
| hypothetical protein | DIC56_01910 | Not Available | Negative | 399118 - 399387 | 10268.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
