Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DIC56_21040 | Not Available | Negative | 4209092 - 4209685 | 22122.2 |
| dna polymerase iii subunit beta | DIC56_21045 | Not Available | Negative | 4209807 - 4210925 | 40357.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DIC56_21050 | Not Available | Positive | 4211234 - 4212091 | 30127.2 |
| yran family protein | DIC56_21055 | Not Available | Positive | 4212109 - 4212471 | 13813.8 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | DIC56_21060 | Not Available | Positive | 4212610 - 4213926 | 47697.4 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | DIC56_21065 | Not Available | Positive | 4213998 - 4214882 | 32792.4 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DIC56_21070 | Not Available | Positive | 4214893 - 4215741 | 31233.4 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DIC56_21075 | Not Available | Positive | 4215744 - 4216859 | 40168.9 |
| cupin | DIC56_21080 | Not Available | Positive | 4217025 - 4217525 | 18298.9 |
| glutathione synthase | DIC56_21085 | Not Available | Positive | 4217615 - 4218562 | 35297.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
