Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | DIC56_20790 | Not Available | Positive | 4159843 - 4160616 | 27122.7 |
| xanthine dehydrogenase small subunit | DIC56_20795 | Not Available | Positive | 4160650 - 4162119 | 53251.7 |
| xanthine dehydrogenase molybdopterin binding subunit | DIC56_20800 | Not Available | Positive | 4162123 - 4164459 | 85286.6 |
| sam-dependent methyltransferase | DIC56_20805 | Not Available | Positive | 4164475 - 4165089 | 22560.5 |
| xanthine dehydrogenase accessory protein xdhc | DIC56_20810 | Not Available | Positive | 4165143 - 4165934 | 27582.7 |
| hypothetical protein | DIC56_20815 | Not Available | Negative | 4166040 - 4166282 | 9411.27 |
| lysr family transcriptional regulator | DIC56_20820 | Not Available | Positive | 4166370 - 4166835 | 17542.2 |
| arac family transcriptional regulator | DIC56_20825 | Not Available | Negative | 4166973 - 4167956 | 36045.6 |
| hydrolase | DIC56_20830 | Not Available | Negative | 4167953 - 4168513 | 20670.6 |
| oxidoreductase | DIC56_20835 | Not Available | Positive | 4168711 - 4169697 | 36747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
