Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DIC56_20635 | Not Available | Negative | 4129568 - 4131487 | 70720.3 |
| hypothetical protein | DIC56_20640 | Not Available | Negative | 4131490 - 4132638 | 42205.3 |
| hypothetical protein | DIC56_20645 | Not Available | Negative | 4132667 - 4133755 | 40785.4 |
| cytochrome c family protein | DIC56_20650 | Not Available | Negative | 4133990 - 4134376 | 13666.7 |
| thymidine kinase | DIC56_20655 | Not Available | Negative | 4134488 - 4135069 | 21496.6 |
| glycine/betaine abc transporter substrate-binding protein | DIC56_20660 | Not Available | Positive | 4135299 - 4136255 | 33922.4 |
| choline abc transporter permease subunit | DIC56_20665 | Not Available | Positive | 4136365 - 4137270 | 32211.7 |
| choline abc transporter atp-binding protein | DIC56_20670 | Not Available | Positive | 4137267 - 4138316 | 37788.9 |
| pyridoxamine 5'-phosphate oxidase | DIC56_20675 | Not Available | Positive | 4138364 - 4139113 | 27160.6 |
| transcriptional regulator | DIC56_20680 | Not Available | Positive | 4139229 - 4139546 | 11282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
