Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid oxidase | DIC56_01815 | Not Available | Negative | 378157 - 379341 | 42059.4 |
| 5-methylaminomethyl-2-thiouridine methyltransferase | DIC56_01820 | Not Available | Positive | 379340 - 380074 | 26840.7 |
| hybrid sensor histidine kinase/response regulator | DIC56_01825 | Not Available | Negative | 380063 - 384154 | 152147.0 |
| cytochrome b | DIC56_01830 | Not Available | Negative | 384566 - 385120 | 20589.1 |
| pepsy domain-containing protein | DIC56_01835 | Not Available | Negative | 385141 - 385419 | 9569.43 |
| peptidase | DIC56_01840 | Not Available | Positive | 385554 - 385925 | 13450.0 |
| dna-binding response regulator | DIC56_01845 | Not Available | Positive | 385925 - 386590 | 24778.7 |
| atp-binding protein | DIC56_01850 | Not Available | Positive | 386587 - 387933 | 49176.9 |
| acid phosphatase | DIC56_01855 | Not Available | Positive | 388010 - 388930 | 33220.5 |
| dna alkylation repair protein | DIC56_01860 | Not Available | Negative | 388953 - 390074 | 41106.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
