Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate transporter | DIC56_20535 | Not Available | Negative | 4104605 - 4105789 | 39839.8 |
| hypothetical protein | DIC56_20540 | Not Available | Negative | 4105980 - 4107056 | 39820.6 |
| atp-dependent clp protease proteolytic subunit | DIC56_20545 | Not Available | Negative | 4107296 - 4107877 | 21411.6 |
| asnc family transcriptional regulator | DIC56_20550 | Not Available | Negative | 4107992 - 4108423 | 15529.1 |
| saccharopine dehydrogenase | DIC56_20555 | Not Available | Positive | 4108550 - 4109653 | 39730.7 |
| ydiu family protein | DIC56_20560 | Not Available | Negative | 4109798 - 4111297 | 54219.5 |
| protein hupe | DIC56_20565 | Not Available | Positive | 4111613 - 4112185 | 18605.3 |
| bifunctional diguanylate cyclase/phosphodiesterase | DIC56_20570 | Not Available | Negative | 4112316 - 4114550 | 82395.3 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DIC56_20575 | Not Available | Negative | 4114704 - 4115168 | 17083.4 |
| cation transporter | DIC56_20580 | Not Available | Negative | 4115165 - 4116082 | 31997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
