Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | DIC56_20485 | Not Available | Negative | 4095025 - 4095954 | 34643.8 |
| 4-hydroxyphenylacetate 3-monooxygenase | DIC56_20490 | Not Available | Negative | 4095978 - 4096472 | 17905.2 |
| branched-chain amino acid abc transporter substrate-binding protein | DIC56_20495 | Not Available | Positive | 4096656 - 4097732 | 37575.8 |
| ribulose-phosphate 3-epimerase | DIC56_20500 | Not Available | Positive | 4097847 - 4098524 | 23813.8 |
| hypothetical protein | DIC56_20505 | Not Available | Positive | 4098530 - 4099255 | 26038.5 |
| hypothetical protein | DIC56_20510 | Not Available | Positive | 4099258 - 4099779 | 19469.1 |
| adenylosuccinate lyase | DIC56_20515 | Not Available | Positive | 4099841 - 4100753 | 33744.7 |
| metallophosphatase | DIC56_20520 | Not Available | Positive | 4100801 - 4101709 | 33499.3 |
| alpha/beta hydrolase | DIC56_20525 | Not Available | Negative | 4101778 - 4102560 | 27468.4 |
| 2-isopropylmalate synthase | DIC56_20530 | Not Available | Negative | 4102564 - 4104279 | 63378.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
