Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf455 domain-containing protein | DIC56_20435 | Not Available | Positive | 4085698 - 4086525 | 30499.5 |
| peptidase | DIC56_20440 | Not Available | Positive | 4086786 - 4087994 | 43577.1 |
| lyse family translocator | DIC56_20445 | Not Available | Positive | 4088057 - 4088680 | 21916.4 |
| rna helicase | DIC56_20450 | Not Available | Positive | 4088828 - 4090333 | 55698.6 |
| dna mismatch repair protein mutt | DIC56_20455 | Not Available | Positive | 4090333 - 4090740 | 14936.9 |
| competence protein tfox | DIC56_20460 | Not Available | Negative | 4090702 - 4091088 | 14318.2 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | DIC56_20465 | Not Available | Negative | 4091094 - 4092728 | 56691.8 |
| xdhc/coxf family protein | DIC56_20470 | Not Available | Negative | 4092725 - 4093432 | 25296.5 |
| xdhc/coxi family protein | DIC56_20475 | Not Available | Negative | 4093432 - 4093761 | 11589.7 |
| vwa domain-containing protein | DIC56_20480 | Not Available | Negative | 4093758 - 4095023 | 47376.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
