Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DIC56_20170 | Not Available | Positive | 4026104 - 4027345 | 43417.4 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DIC56_20180 | Not Available | Negative | 4028629 - 4028919 | 11071.7 |
| hypothetical protein | DIC56_20185 | Not Available | Negative | 4028916 - 4029161 | 9092.61 |
| hypothetical protein | DIC56_20190 | Not Available | Positive | 4029160 - 4029375 | 8144.83 |
| hypothetical protein | DIC56_20195 | Not Available | Negative | 4029477 - 4029710 | 8041.49 |
| abc transporter atp-binding protein | DIC56_20200 | Not Available | Positive | 4030000 - 4031064 | 37985.4 |
| abc transporter substrate-binding protein | DIC56_20205 | Not Available | Positive | 4031310 - 4032599 | 46137.0 |
| abc transporter permease | DIC56_20210 | Not Available | Positive | 4032661 - 4033530 | 32439.4 |
| abc transporter permease | DIC56_20215 | Not Available | Positive | 4033560 - 4034366 | 29707.1 |
| sugar phosphate isomerase | DIC56_20220 | Not Available | Positive | 4034381 - 4035199 | 29445.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
