Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DIC56_19535 | Not Available | Negative | 3903797 - 3905008 | 42662.9 |
| trna dihydrouridine synthase dusb | DIC56_19540 | Not Available | Positive | 3905199 - 3906182 | 35021.1 |
| two-component sensor histidine kinase | DIC56_19545 | Not Available | Positive | 3906182 - 3907321 | 41063.0 |
| nitrogen regulation protein nr(i) | DIC56_19550 | Not Available | Positive | 3907321 - 3908775 | 53822.9 |
| pas domain-containing sensor histidine kinase | DIC56_19555 | Not Available | Positive | 3908954 - 3911224 | 82707.2 |
| sigma-54-dependent fis family transcriptional regulator | DIC56_19560 | Not Available | Positive | 3911214 - 3912578 | 50517.0 |
| trk system potassium transporter trka | DIC56_19565 | Not Available | Positive | 3912639 - 3914015 | 50244.9 |
| d-amino acid aminotransferase | DIC56_19570 | Not Available | Positive | 3914044 - 3914907 | 31740.3 |
| rna chaperone hfq | DIC56_19575 | Not Available | Positive | 3915016 - 3915267 | 9448.42 |
| gtpase hflx | DIC56_19580 | Not Available | Positive | 3915264 - 3916679 | 51824.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
