Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | DIC56_19135 | Not Available | Positive | 3829930 - 3831219 | 46284.6 |
| transcriptional regulator nrdr | DIC56_19140 | Not Available | Positive | 3831229 - 3831705 | 18064.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DIC56_19145 | Not Available | Positive | 3831739 - 3832806 | 37244.7 |
| riboflavin synthase | DIC56_19150 | Not Available | Positive | 3832806 - 3833426 | 22357.5 |
| hypothetical protein | DIC56_19155 | Not Available | Negative | 3833594 - 3833794 | 7525.52 |
| hypothetical protein | DIC56_19160 | Not Available | Negative | 3833885 - 3834232 | 12505.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | DIC56_19165 | Not Available | Positive | 3834712 - 3835170 | 15966.1 |
| transcription antitermination factor nusb | DIC56_19170 | Not Available | Positive | 3835174 - 3835656 | 17669.1 |
| mfs transporter | DIC56_19175 | Not Available | Positive | 3835680 - 3836903 | 42735.6 |
| outer membrane protein assembly factor bame | DIC56_19185 | Not Available | Negative | 3839205 - 3839702 | 17880.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
