Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease | DIC56_18985 | Not Available | Negative | 3794806 - 3795468 | 24541.1 |
| hypothetical protein | DIC56_18990 | Not Available | Positive | 3795555 - 3796490 | 33284.9 |
| hypothetical protein | DIC56_18995 | Not Available | Negative | 3796512 - 3796916 | 14767.6 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | DIC56_19000 | Not Available | Negative | 3797022 - 3797873 | 31800.3 |
| dehydrogenase | DIC56_19005 | Not Available | Positive | 3797950 - 3800070 | 77419.0 |
| adp-ribose pyrophosphatase | DIC56_19010 | Not Available | Positive | 3800067 - 3800672 | 22156.7 |
| outer membrane protease | DIC56_19015 | Not Available | Negative | 3800710 - 3801660 | 34158.8 |
| short-chain dehydrogenase | DIC56_19020 | Not Available | Positive | 3801924 - 3802715 | 27682.8 |
| phosphoribosylglycinamide formyltransferase | DIC56_19025 | Not Available | Negative | 3802725 - 3803381 | 23017.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | DIC56_19030 | Not Available | Negative | 3803378 - 3804451 | 36511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
