Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | DIC56_18885 | Not Available | Negative | 3776106 - 3777194 | 39365.8 |
| lps export abc transporter permease lptf | DIC56_18890 | Not Available | Negative | 3777188 - 3778369 | 43148.9 |
| phosphatase | DIC56_18895 | Not Available | Negative | 3778479 - 3779177 | 25530.6 |
| leucyl aminopeptidase | DIC56_18900 | Not Available | Positive | 3779465 - 3780958 | 52428.2 |
| dna polymerase iii subunit chi | DIC56_18905 | Not Available | Positive | 3780979 - 3781428 | 16992.7 |
| glycosyl transferase family 1 | DIC56_18910 | Not Available | Negative | 3781442 - 3783331 | 68580.0 |
| ggdef domain-containing protein | DIC56_18915 | Not Available | Negative | 3783455 - 3784519 | 38288.8 |
| damage-inducible protein dinb | DIC56_18920 | Not Available | Negative | 3784883 - 3785392 | 19229.7 |
| beta-aryl ether-cleaving protein | DIC56_18925 | Not Available | Positive | 3785538 - 3786221 | 25408.7 |
| nucleoside-diphosphate kinase | DIC56_18930 | Not Available | Positive | 3786374 - 3786796 | 15325.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
