Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_01610 | Not Available | Negative | 342206 - 342463 | 9471.38 |
| gntr family transcriptional regulator | DIC56_01615 | Not Available | Positive | 342807 - 343520 | 25990.1 |
| abc transporter substrate-binding protein | DIC56_01620 | Not Available | Positive | 343583 - 344557 | 35987.9 |
| trap transporter permease dctq | DIC56_01625 | Not Available | Positive | 344628 - 345203 | 21835.7 |
| abc transporter permease | DIC56_01630 | Not Available | Positive | 345207 - 346613 | 49969.8 |
| l-idonate 5-dehydrogenase | DIC56_01635 | Not Available | Positive | 346682 - 347776 | 38233.1 |
| dehydrogenase | DIC56_01640 | Not Available | Positive | 347831 - 348841 | 36503.8 |
| pilz domain-containing protein | DIC56_01650 | Not Available | Negative | 349652 - 349945 | 10979.2 |
| hypothetical protein | DIC56_01655 | Not Available | Positive | 349907 - 350611 | 27003.8 |
| gaf domain-containing protein | DIC56_01660 | Not Available | Negative | 350341 - 351678 | 49040.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
