Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_18105 | Not Available | Positive | 3617372 - 3618190 | 29890.1 |
| aldehyde-activating protein | DIC56_18110 | Not Available | Positive | 3618315 - 3618707 | 14502.1 |
| chloride channel protein | DIC56_18115 | Not Available | Negative | 3618839 - 3620614 | 62511.9 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | DIC56_18120 | Not Available | Negative | 3620669 - 3621496 | 30697.7 |
| luxr family transcriptional regulator | DIC56_18125 | Not Available | Negative | 3621500 - 3622279 | 28698.2 |
| methionine--trna ligase | DIC56_18130 | Not Available | Negative | 3622284 - 3623840 | 58117.9 |
| dna polymerase iii subunit delta' | DIC56_18135 | Not Available | Negative | 3623952 - 3624977 | 36749.9 |
| dtmp kinase | DIC56_18140 | Not Available | Negative | 3624974 - 3625669 | 24954.7 |
| d-alanyl-d-alanine carboxypeptidase | DIC56_18145 | Not Available | Negative | 3625758 - 3626921 | 42118.1 |
| septal ring lytic transglycosylase rlpa family protein | DIC56_18150 | Not Available | Negative | 3626970 - 3628013 | 36553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
