Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell filamentation protein fic | DIC56_18005 | Not Available | Negative | 3594863 - 3596410 | 58022.5 |
| xre family transcriptional regulator | DIC56_18010 | Not Available | Positive | 3596618 - 3596944 | 11935.3 |
| integrase | DIC56_18015 | Not Available | Negative | 3596971 - 3598047 | 39344.5 |
| hypothetical protein | DIC56_18020 | Not Available | Negative | 3598044 - 3599249 | 44069.2 |
| integrase | DIC56_18025 | Not Available | Negative | 3599447 - 3600595 | 42183.5 |
| rpir family transcriptional regulator | DIC56_18030 | Not Available | Negative | 3600696 - 3601548 | 31686.6 |
| n-formylglutamate amidohydrolase | DIC56_18035 | Not Available | Positive | 3601728 - 3602501 | 27939.3 |
| c4-dicarboxylate abc transporter permease | DIC56_18040 | Not Available | Positive | 3602629 - 3603138 | 18980.9 |
| c4-dicarboxylate abc transporter | DIC56_18045 | Not Available | Positive | 3603135 - 3603903 | 27341.1 |
| excinuclease abc subunit a | DIC56_18050 | Not Available | Negative | 3603904 - 3606176 | 83239.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
