Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entry exclusion protein trbk | DIC56_17950 | Not Available | Negative | 3583943 - 3584173 | 8216.92 |
| p-type conjugative transfer protein trbj | DIC56_17955 | Not Available | Negative | 3584170 - 3584979 | 29480.7 |
| conjugal transfer protein trbe | DIC56_17960 | Not Available | Negative | 3584951 - 3587419 | 91571.4 |
| conjugal transfer protein trbd | DIC56_17965 | Not Available | Negative | 3587429 - 3587728 | 11226.2 |
| conjugal transfer protein trbc | DIC56_17970 | Not Available | Negative | 3587721 - 3588125 | 13331.3 |
| p-type conjugative transfer atpase trbb | DIC56_17975 | Not Available | Negative | 3588115 - 3589086 | 34700.7 |
| autoinducer synthesis protein | DIC56_17980 | Not Available | Negative | 3589083 - 3589718 | 22990.5 |
| plasmid partitioning protein repa | DIC56_17985 | Not Available | Positive | 3590093 - 3591307 | 45190.0 |
| plasmid partitioning protein repb | DIC56_17990 | Not Available | Positive | 3591304 - 3592326 | 37755.2 |
| replication initiation protein repc | DIC56_17995 | Not Available | Positive | 3592482 - 3593696 | 44108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
