Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease | DIC56_17580 | Not Available | Negative | 3515828 - 3516601 | 27705.0 |
| 2-keto-gluconate dehydrogenase | DIC56_17585 | Not Available | Positive | 3516602 - 3517053 | 16367.2 |
| hypothetical protein | DIC56_17590 | Not Available | Negative | 3517152 - 3517673 | 19331.8 |
| ceramide glucosyltransferase | DIC56_17595 | Not Available | Negative | 3517790 - 3518983 | 43769.8 |
| deda family protein | DIC56_17600 | Not Available | Negative | 3519084 - 3519686 | 20915.8 |
| hypothetical protein | DIC56_17605 | Not Available | Negative | 3519683 - 3520039 | 13513.4 |
| uracil-dna glycosylase | DIC56_17610 | Not Available | Positive | 3520150 - 3520246 | 3862.59 |
| excinuclease abc subunit a | DIC56_17615 | Not Available | Positive | 3520247 - 3520858 | 22554.0 |
| glutathione s-transferase | DIC56_17620 | Not Available | Positive | 3520862 - 3521485 | 22868.7 |
| duf72 domain-containing protein | DIC56_17625 | Not Available | Positive | 3521558 - 3522361 | 29538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
