Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer signal peptidase traf | DIC56_17530 | Not Available | Positive | 3508533 - 3509063 | 18921.2 |
| conjugal transfer protein trab | DIC56_17535 | Not Available | Positive | 3509092 - 3509374 | 9795.13 |
| hypothetical protein | DIC56_17540 | Not Available | Positive | 3509380 - 3509670 | 9974.96 |
| ykgj family cysteine cluster protein | DIC56_17545 | Not Available | Negative | 3509679 - 3510017 | 12288.5 |
| mfs transporter | DIC56_17550 | Not Available | Negative | 3510070 - 3511239 | 40078.4 |
| hypothetical protein | DIC56_17555 | Not Available | Negative | 3511353 - 3511874 | 19748.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DIC56_17560 | Not Available | Negative | 3511884 - 3512830 | 32988.7 |
| two-component sensor histidine kinase | DIC56_17565 | Not Available | Negative | 3512831 - 3513068 | 8243.02 |
| glycosyl transferase family 1 | DIC56_17570 | Not Available | Positive | 3513512 - 3514838 | 49926.9 |
| u32 family peptidase | DIC56_17575 | Not Available | Negative | 3514887 - 3515825 | 33902.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
