Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DIC56_17380 | Not Available | Positive | 3475852 - 3477066 | 42786.4 |
| abc transporter permease | DIC56_17385 | Not Available | Positive | 3477063 - 3478135 | 38485.9 |
| multidrug transporter acrb | DIC56_17390 | Not Available | Negative | 3478136 - 3481146 | 107774.0 |
| efflux transporter periplasmic adaptor subunit | DIC56_17395 | Not Available | Negative | 3481143 - 3482123 | 34766.9 |
| duf2892 domain-containing protein | DIC56_17400 | Not Available | Negative | 3482149 - 3482349 | 7278.32 |
| mfs transporter | DIC56_17405 | Not Available | Positive | 3482604 - 3483803 | 41436.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DIC56_17410 | Not Available | Negative | 3483807 - 3486083 | 81041.9 |
| isoquinoline 1-oxidoreductase | DIC56_17415 | Not Available | Negative | 3486086 - 3486544 | 16059.3 |
| tetr/acrr family transcriptional regulator | DIC56_17420 | Not Available | Positive | 3486456 - 3487211 | 27709.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DIC56_17425 | Not Available | Positive | 3487293 - 3488543 | 44696.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
