Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | DIC56_17120 | Not Available | Negative | 3424203 - 3425336 | 40920.1 |
| lysr family transcriptional regulator | DIC56_17125 | Not Available | Positive | 3425866 - 3426759 | 32940.3 |
| duf1007 domain-containing protein | DIC56_17130 | Not Available | Positive | 3426859 - 3427500 | 23536.8 |
| delayed-early response protein/equilibrative nucleoside transporter | DIC56_17135 | Not Available | Positive | 3427494 - 3428546 | 36288.0 |
| hypothetical protein | DIC56_17140 | Not Available | Negative | 3428537 - 3428749 | 7847.89 |
| gnat family n-acetyltransferase | DIC56_17145 | Not Available | Negative | 3428746 - 3429441 | 25998.8 |
| duf533 domain-containing protein | DIC56_17150 | Not Available | Negative | 3429528 - 3430223 | 23765.2 |
| adenylate cyclase | DIC56_17160 | Not Available | Positive | 3431018 - 3431506 | 18520.9 |
| metal-binding protein | DIC56_17165 | Not Available | Positive | 3431490 - 3432401 | 33680.2 |
| transcriptional regulator | DIC56_17170 | Not Available | Positive | 3432450 - 3433145 | 26213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
