Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-glucose phosphate-specific phosphoglucomutase | DIC56_16970 | Not Available | Positive | 3391054 - 3392682 | 58105.6 |
| glycogen debranching enzyme glgx | DIC56_16975 | Not Available | Positive | 3392693 - 3394657 | 72670.9 |
| nodulation protein n | DIC56_16980 | Not Available | Positive | 3394742 - 3395230 | 17946.7 |
| duf2332 domain-containing protein | DIC56_16985 | Not Available | Positive | 3395232 - 3396287 | 38520.3 |
| sarcosine oxidase subunit gamma | DIC56_16990 | Not Available | Negative | 3396309 - 3396863 | 19107.7 |
| sarcosine oxidase subunit alpha | DIC56_16995 | Not Available | Negative | 3396856 - 3399849 | 107897.0 |
| sarcosine oxidase subunit delta | DIC56_17000 | Not Available | Negative | 3399846 - 3400166 | 12047.3 |
| sarcosine oxidase subunit beta | DIC56_17005 | Not Available | Negative | 3400186 - 3401439 | 45390.1 |
| 30s ribosomal protein s21 | DIC56_17010 | Not Available | Positive | 3401738 - 3401968 | 9126.4 |
| glcnac transferase | DIC56_17015 | Not Available | Positive | 3402081 - 3402962 | 32027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
