Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acyl-d-amino-acid deacylase | DIC56_01390 | Not Available | Positive | 296870 - 298462 | 57854.0 |
| hypothetical protein | DIC56_01395 | Not Available | Negative | 298466 - 299656 | 44139.3 |
| ornithine cyclodeaminase | DIC56_01400 | Not Available | Negative | 299695 - 300666 | 34046.1 |
| hypothetical protein | DIC56_01405 | Not Available | Negative | 300685 - 301494 | 28451.1 |
| udp-glucose 4-epimerase | DIC56_01410 | Not Available | Positive | 301727 - 302602 | 32879.9 |
| bicyclomycin resistance protein | DIC56_01415 | Not Available | Positive | 302887 - 304095 | 44323.8 |
| abc transporter permease | DIC56_01420 | Not Available | Positive | 304172 - 305080 | 33430.8 |
| hypothetical protein | DIC56_01425 | Not Available | Positive | 305070 - 305900 | 31510.5 |
| sugar abc transporter atp-binding protein | DIC56_01430 | Not Available | Positive | 305940 - 307013 | 39357.8 |
| hypothetical protein | DIC56_01435 | Not Available | Negative | 307392 - 308138 | 26508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
