Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_16275 | Not Available | Positive | 3255002 - 3255859 | 31330.1 |
| duf2063 domain-containing protein | DIC56_16280 | Not Available | Positive | 3255867 - 3256637 | 27293.4 |
| doxx family protein | DIC56_16285 | Not Available | Positive | 3256637 - 3257122 | 17796.9 |
| ai-2e family transporter | DIC56_16290 | Not Available | Positive | 3257308 - 3258501 | 42414.6 |
| duf1491 domain-containing protein | DIC56_16295 | Not Available | Positive | 3258599 - 3258952 | 13232.8 |
| hypothetical protein | DIC56_16300 | Not Available | Negative | 3258956 - 3260017 | 38939.4 |
| hypothetical protein | DIC56_16305 | Not Available | Positive | 3260354 - 3260557 | 7404.18 |
| duf1254 domain-containing protein | DIC56_16310 | Not Available | Negative | 3260588 - 3261139 | 19708.7 |
| hypothetical protein | DIC56_16320 | Not Available | Negative | 3261894 - 3263693 | 67765.2 |
| hypothetical protein | DIC56_16325 | Not Available | Positive | 3264258 - 3264488 | 8130.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
