Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | DIC56_16225 | Not Available | Positive | 3248738 - 3249805 | 39179.4 |
| hypothetical protein | DIC56_16230 | Not Available | Positive | 3250161 - 3250478 | 11809.2 |
| hypothetical protein | DIC56_16235 | Not Available | Negative | 3250495 - 3250860 | 13733.7 |
| ligand-binding protein sh3 | DIC56_16240 | Not Available | Positive | 3251540 - 3251860 | 11033.8 |
| ligand-binding protein sh3 | DIC56_16245 | Not Available | Positive | 3251920 - 3252309 | 13766.9 |
| marr family transcriptional regulator | DIC56_16250 | Not Available | Positive | 3252459 - 3252869 | 15435.5 |
| duf1109 domain-containing protein | DIC56_16255 | Not Available | Negative | 3252910 - 3253545 | 21785.4 |
| rna polymerase subunit sigma | DIC56_16260 | Not Available | Negative | 3253542 - 3254096 | 20841.0 |
| hypothetical protein | DIC56_16265 | Not Available | Positive | 3254323 - 3254595 | 9145.92 |
| hypothetical protein | DIC56_16270 | Not Available | Positive | 3254642 - 3254926 | 9372.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
