Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | DIC56_15810 | Not Available | Negative | 3183332 - 3184954 | 60324.1 |
| hypothetical protein | DIC56_15815 | Not Available | Positive | 3185131 - 3185457 | 11804.8 |
| vapc toxin family pin domain ribonuclease | DIC56_15820 | Not Available | Negative | 3185667 - 3186113 | 15665.8 |
| prevent-host-death protein | DIC56_15825 | Not Available | Negative | 3186110 - 3186361 | 8989.87 |
| phosphatase | DIC56_15830 | Not Available | Positive | 3186536 - 3187387 | 30979.8 |
| transcriptional regulator | DIC56_15835 | Not Available | Negative | 3187384 - 3188088 | 26095.6 |
| lyse family translocator | DIC56_15840 | Not Available | Positive | 3188219 - 3188848 | 22137.7 |
| cytochrome c556 | DIC56_15845 | Not Available | Positive | 3189044 - 3189487 | 15236.5 |
| diacylglycerol kinase | DIC56_15850 | Not Available | Positive | 3189589 - 3190506 | 31933.8 |
| hica protein | DIC56_15855 | Not Available | Positive | 3190542 - 3190796 | 9578.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
