Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | DIC56_15755 | Not Available | Positive | 3173683 - 3174723 | 36176.8 |
| sugar abc transporter permease | DIC56_15760 | Not Available | Positive | 3174886 - 3176196 | 45921.4 |
| abc transporter atp-binding protein | DIC56_15765 | Not Available | Positive | 3176211 - 3176996 | 28134.1 |
| type ii toxin-antitoxin system higb family toxin | DIC56_15770 | Not Available | Positive | 3177207 - 3177518 | 11736.0 |
| transcriptional regulator | DIC56_15775 | Not Available | Positive | 3177530 - 3177910 | 13821.7 |
| branched-chain amino acid aminotransferase | DIC56_15780 | Not Available | Positive | 3178189 - 3179073 | 32482.7 |
| pyridine nucleotide-disulfide oxidoreductase | DIC56_15785 | Not Available | Positive | 3179239 - 3180366 | 41236.2 |
| mfs transporter | DIC56_15790 | Not Available | Positive | 3180542 - 3181711 | 39823.1 |
| ykgj family cysteine cluster protein | DIC56_15795 | Not Available | Positive | 3181765 - 3182103 | 12213.5 |
| superoxide dismutase | DIC56_15805 | Not Available | Positive | 3182625 - 3183227 | 22270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
