Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | DIC56_15555 | Not Available | Positive | 3136468 - 3137475 | 35389.2 |
| deor family transcriptional regulator | DIC56_15560 | Not Available | Negative | 3137506 - 3138264 | 27114.1 |
| duf4406 domain-containing protein | DIC56_15565 | Not Available | Positive | 3138386 - 3138742 | 12831.5 |
| dioxygenase | DIC56_15570 | Not Available | Negative | 3138838 - 3139257 | 15475.5 |
| glutathione s-transferase | DIC56_15575 | Not Available | Negative | 3139337 - 3139987 | 23782.6 |
| hypothetical protein | DIC56_15580 | Not Available | Positive | 3140298 - 3140855 | 21509.9 |
| tigr03808 family tat-translocated repetitive protein | DIC56_15585 | Not Available | Negative | 3140904 - 3142277 | 47472.1 |
| hypothetical protein | DIC56_15590 | Not Available | Positive | 3142456 - 3142659 | 6955.16 |
| marr family transcriptional regulator | DIC56_15595 | Not Available | Negative | 3142786 - 3143334 | 20490.6 |
| mfs transporter | DIC56_15600 | Not Available | Positive | 3143457 - 3144995 | 52969.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
