Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase nrfefg subunit nrfe | DIC56_15325 | Not Available | Negative | 3097327 - 3099315 | 71561.8 |
| cytochrome c maturation protein ccme | DIC56_15330 | Not Available | Negative | 3099312 - 3099764 | 15825.2 |
| c-type cytochrome biogenesis protein ccmi | DIC56_15335 | Not Available | Negative | 3099761 - 3100903 | 39800.9 |
| hypothetical protein | DIC56_15340 | Not Available | Negative | 3101020 - 3101457 | 14942.6 |
| histidine kinase | DIC56_15345 | Not Available | Negative | 3101557 - 3102969 | 51363.4 |
| merr family transcriptional regulator | DIC56_15430 | Not Available | Positive | 3114551 - 3114943 | 15021.0 |
| 4-carboxymuconolactone decarboxylase | DIC56_15435 | Not Available | Positive | 3114915 - 3115176 | 9316.07 |
| sulfate adenylyltransferase small subunit | DIC56_15440 | Not Available | Negative | 3115177 - 3115900 | 27902.2 |
| phosphoadenylyl-sulfate reductase | DIC56_15445 | Not Available | Negative | 3116100 - 3116846 | 27160.1 |
| hypothetical protein | DIC56_15450 | Not Available | Positive | 3117128 - 3117538 | 14716.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
