Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | DIC56_01290 | Not Available | Positive | 277127 - 279031 | 70495.2 |
| hypothetical protein | DIC56_01295 | Not Available | Positive | 279024 - 279819 | 29064.9 |
| mfs transporter | DIC56_01300 | Not Available | Positive | 279955 - 281178 | 42262.5 |
| iclr family transcriptional regulator | DIC56_01305 | Not Available | Negative | 281521 - 282330 | 30154.2 |
| reactive intermediate/imine deaminase | DIC56_01310 | Not Available | Negative | 282382 - 282771 | 14083.8 |
| atp-binding protein | DIC56_01315 | Not Available | Negative | 282789 - 283559 | 28309.8 |
| abc transporter permease | DIC56_01320 | Not Available | Negative | 283573 - 284238 | 23524.2 |
| amino acid abc transporter permease | DIC56_01325 | Not Available | Negative | 284243 - 284905 | 23799.2 |
| abc transporter substrate-binding protein | DIC56_01330 | Not Available | Negative | 284964 - 285809 | 30837.2 |
| alanine racemase | DIC56_01335 | Not Available | Positive | 286001 - 287074 | 37513.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
