Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | DIC56_15275 | Not Available | Negative | 3081799 - 3082737 | 33091.1 |
| aminopeptidase n | DIC56_15280 | Not Available | Positive | 3083037 - 3085685 | 96985.5 |
| hypothetical protein | DIC56_15285 | Not Available | Negative | 3085722 - 3086597 | 32220.1 |
| pas domain-containing sensor histidine kinase | DIC56_15290 | Not Available | Positive | 3086841 - 3089180 | 85280.2 |
| peptidase | DIC56_15295 | Not Available | Positive | 3089261 - 3089860 | 21869.7 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | DIC56_15300 | Not Available | Negative | 3089873 - 3092830 | 108889.0 |
| two-component sensor histidine kinase | DIC56_15305 | Not Available | Negative | 3092892 - 3094301 | 50542.0 |
| dna-binding response regulator | DIC56_15310 | Not Available | Negative | 3094311 - 3095069 | 28212.0 |
| serine peptidase | DIC56_15315 | Not Available | Negative | 3095154 - 3096707 | 53555.2 |
| cytochrome c-type biogenesis protein ccmh | DIC56_15320 | Not Available | Negative | 3096878 - 3097330 | 16334.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
